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core-code / Bioformats Image Toolbox
This toolbox re-implements the OME Bio-Formats MATLAB Toolbox as a class in MATLAB.
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dowelllab / DAStk
Differential ATAC-Seq toolkit
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jode5573 / bioverify
Tools to verify several popular bioinformatics formats quickly and efficiently.
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dowelllab / motif_displacement_analysis
A Python package for visualizing and exploring MD score computations
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dowelllab / Tfit
Transcription fit (Tfit) utilizes a generative model of RNA polymerase II to identify sites of divergent transcription in nascent transcription assays like GRO-seq, PRO-seq, GRO-cap and others.
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dowelllab / MDS
Algorithms required to compute Motif Displacement Scores
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core-code / free-diffusion-simulator
A MATLAB simulation for freely diffusing particles within a nucleus
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hackathon / platypus
contains code for the frontend web presence of the hackathon education platform
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jode5573 / pipeline_builder
A go-based utility for stitching many steps with potentially different memory and core requirements together. Outputs a bunch of sbatch scripts and one script to wrap and run them from a login node.
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BioFrontiers IT / abrf_webinar
Used to demonstrate developing a very basic workflow with continuous analysis for ABRF Genome Webinar - December 2018